STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFTPBUncharacterized protein. (519 aa)    
Predicted Functional Partners:
GALC
Galactosylceramidase.
    
 
 0.756
SLC34A2
Solute carrier family 34 member 2.
   
  
 0.746
GBA
Glucosylceramidase.
   
 0.674
TMEM130
Transmembrane protein 130.
   
 0.674
GPR37
G protein-coupled receptor 37.
     
 0.649
GPR37L1
G protein-coupled receptor 37 like 1.
     
 0.649
LAMP1
Lysosomal associated membrane protein 1.
   
  
 0.585
CTSB
Cathepsin B; Belongs to the peptidase C1 family.
   
 
 0.550
CTSZ
Cathepsin Z; Belongs to the peptidase C1 family.
   
 
 0.542
NPB
Neuropeptide B.
   
 
  0.523
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.