STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NLGN1Neuroligin 1. (635 aa)    
Predicted Functional Partners:
LOC102352021
LAM_G_DOMAIN domain-containing protein.
    
 0.984
MDGA2
MAM domain-containing protein.
   
 0.760
H3AM13_LATCH
COesterase domain-containing protein.
 
     0.702
SHANK2
SH3 and multiple ankyrin repeat domains 2.
     
 0.662
CASK
Calcium/calmodulin dependent serine protein kinase; Belongs to the MAGUK family.
   
 0.620
UTP20
UTP20 small subunit processome component.
   
 0.602
WDR43
WD repeat domain 43.
   
 0.600
LOC102346129
Zinc finger MYND-type containing 8.
      
 0.593
ZMYND8
Zinc finger, MYND-type containing 8.
      
 0.589
LOC102356557
Neurexin 3a.
    
 0.578
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.