STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC102363052Si:dkey-3h3.3. (215 aa)    
Predicted Functional Partners:
H3AXB5_LATCH
Poly [ADP-ribose] polymerase.
 
 
 0.942
DTX1
Deltex E3 ubiquitin ligase 1.
  
 
0.919
LOC102357987
Uncharacterized protein.
    
 0.910
NOTCH2
Notch receptor 2.
    
 0.910
LOC102353790
Uncharacterized protein.
    
 0.906
NOTCH3
Notch receptor 3.
    
 0.906
DTX3
Deltex E3 ubiquitin ligase 3.
  
  
 
0.903
H2ZUR6_LATCH
Poly [ADP-ribose] polymerase.
 
 
 0.617
PARP14
Poly [ADP-ribose] polymerase.
 
 
 0.617
H3AL20_LATCH
Poly [ADP-ribose] polymerase.
 
 
 0.589
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.