Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
TTC21BTetratricopeptide repeat domain 21B. (1311 aa)    
Predicted Functional Partners:
IFT140
Intraflagellar transport 140.
   
 0.999
WDR19
WD repeat domain 19.
   
 0.999
IFT122
Intraflagellar transport 122.
   
 0.999
WDR35
WD repeat-containing protein 35.
   
 0.999
IFT43
Uncharacterized protein.
    
 0.999
IFT80
Intraflagellar transport 80.
   
 0.951
IFT81
Intraflagellar transport 81.
   
 0.941
IFT57
Intraflagellar transport 57.
  
 
 0.936
LOC102349115
WD_REPEATS_REGION domain-containing protein.
   
 0.933
IFT46
Intraflagellar transport 46.
    
 0.932
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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