Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
MRPL52Mitochondrial ribosomal protein L52. (139 aa)    
Predicted Functional Partners:
MRPL1
Mitochondrial ribosomal protein L1.
   
 
 0.991
MRPL30
Mitochondrial ribosomal protein L30.
   
 
 0.988
MRPL47
Mitochondrial ribosomal protein L47.
   
 
 0.988
MRPL55
Zgc:171480.
   
 
 0.988
MRPL20
Mitochondrial ribosomal protein L20; Belongs to the bacterial ribosomal protein bL20 family.
   
 
 0.986
MRPS30
Mitochondrial ribosomal protein S30.
    
 
 0.984
MRPL51
Mitochondrial ribosomal protein L51.
   
 
 0.983
MRPL42
Mitochondrial ribosomal protein L42.
   
 
 0.983
NDUFAB1
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.
   
 0.980
MRPS18A
Mitochondrial ribosomal protein S18A.
   
 
 0.979
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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