Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
H3A460_LATCHYippee domain-containing protein. (132 aa)    
Predicted Functional Partners:
WDR26
WD_REPEATS_REGION domain-containing protein.
   
 
 0.799
GID8
GID complex subunit 8 homolog.
   
 
 0.745
ARMC8
Armadillo repeat containing 8.
    
 0.742
RANBP9
RAN binding protein 9.
   
 
 0.619
RANBP10
RAN binding protein 10.
   
 
 0.619
LOC102357753
LisH domain-containing protein.
   
 
 0.606
ITM2B
Integral membrane protein 2B.
   
  
 0.583
RMND5A
Required for meiotic nuclear division 5 homolog A.
    
 
 0.561
RMND5B
Required for meiotic nuclear division 5 homolog B.
    
 
 0.561
H2ZSI1_LATCH
LisH domain-containing protein.
   
 
 0.526
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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