Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC102362574X globin; Belongs to the globin family. (144 aa)    
Predicted Functional Partners:
ADGB
Calpain catalytic domain-containing protein; Belongs to the peptidase C2 family.
   
 
 0.686
RPS9
Ribosomal protein S9; Belongs to the universal ribosomal protein uS4 family.
    
 
 0.683
LOC102346357
Myoglobin; Serves as a reserve supply of oxygen and facilitates the movement of oxygen within muscles.
      
 0.678
MB
Myoglobin; Serves as a reserve supply of oxygen and facilitates the movement of oxygen within muscles.
      
 0.662
CYB5R4
Cytochrome b5 reductase 4.
   
 0.597
ELMO1
Engulfment and cell motility 1.
    
   0.550
ELMO3
Engulfment and cell motility 3.
    
   0.550
ELMO2
Engulfment and cell motility 2.
    
   0.550
AGTR2
Angiotensin II receptor type 2; Belongs to the G-protein coupled receptor 1 family.
     
 0.448
H3AEM8_LATCH
DHR-1 domain-containing protein; Belongs to the DOCK family.
   
   0.447
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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