STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TSPAN33Tetraspanin 33; Belongs to the tetraspanin (TM4SF) family. (177 aa)    
Predicted Functional Partners:
TMEM182
Transmembrane protein 182.
      
 0.533
TM6SF2
Transmembrane 6 superfamily member 2.
      
 0.479
TM6SF1
Transmembrane 6 superfamily member 1.
      
 0.479
PTGFRN
Prostaglandin F2 receptor inhibitor.
    
 
 0.476
ADAM10
ADAM metallopeptidase domain 10b.
    
 0.475
TSG101
Tumor susceptibility 101.
      
 0.465
SMO
Smoothened, frizzled class receptor; Belongs to the G-protein coupled receptor Fz/Smo family.
 
      0.455
PDZD11
PDZ domain containing 11.
    
 0.436
PLEKHA7
Pleckstrin homology domain containing A7.
    
 
 0.425
TSPAN3
Tetraspanin.
      
0.418
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.