Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
TSPAN33Tetraspanin 33; Belongs to the tetraspanin (TM4SF) family. (177 aa)    
Predicted Functional Partners:
CCDC186
Coiled-coil domain containing 186.
      
 0.784
POLD2
DNA polymerase delta 2, accessory subunit.
      
 0.743
CIDEC
Cell death inducing DFFA like effector c.
      
 0.728
EXO1
Exonuclease 1.
      
 0.679
PDZD11
PDZ domain containing 11.
    
 0.678
FBLN5
Fibulin 5.
     
 0.675
LOC102355168
Peptidase S1 domain-containing protein; Belongs to the peptidase S1 family.
     
 0.664
LOC102360115
IFI30 lysosomal thiol reductase.
      
 0.663
C1QTNF1
C1q and TNF related 1.
      
 0.658
TMEM182
Transmembrane protein 182.
      
 0.641
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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