STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CMTM3CKLF like MARVEL transmembrane domain containing 3. (115 aa)    
Predicted Functional Partners:
CMTM4
CKLF like MARVEL transmembrane domain containing 4.
      
 0.685
CMTM7
CKLF like MARVEL transmembrane domain containing 7.
      
 0.596
NSA2
NSA2 ribosome biogenesis factor.
      
 0.558
CMTM8
CKLF like MARVEL transmembrane domain containing 8.
      
 0.553
H3AX18_LATCH
Uncharacterized protein.
      
 0.552
SF3B3
Splicing factor 3b subunit 3.
      
 0.542
PRRG1
Gla domain-containing protein.
      
 0.465
RBM46
RNA binding motif protein 46.
      
 0.454
KYNU
Kynureninase.
      
 0.444
SLC25A11
Solute carrier family 25 member 11; Belongs to the mitochondrial carrier (TC 2.A.29) family.
      
 0.441
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.