Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC102366847Uncharacterized protein; Belongs to the semaphorin family. (542 aa)    
Predicted Functional Partners:
H3A2E1_LATCH
Plexin_cytopl domain-containing protein.
    
 0.962
PLXND1
Plexin D1.
    
 0.701
FAM185A
Family with sequence similarity 185 member A.
    
   0.663
PLXNA3-2
Plexin A3.
    
 0.593
PLXNA1
Plexin A1.
    
 0.593
PLXNA3
Sema domain-containing protein.
    
 0.593
LOC102347877
Uncharacterized protein.
    
 0.593
PLXNA2
Plexin A2.
    
 0.593
ITGA1
Integrin subunit alpha 1; Belongs to the integrin alpha chain family.
    
 0.563
PLXNB1
Plexin B1.
    
 0.500
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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