Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ANKRA2Ankyrin repeat family A member 2. (313 aa)    
Predicted Functional Partners:
RFXAP
Regulatory factor X associated protein.
    
 
 0.849
H3A4J9_LATCH
Si:dkey-88l16.3.
    
 0.695
LRP4
LDL receptor related protein 4.
    
 0.695
LRP2
LDL receptor related protein 2.
    
 0.695
TMEM59L
Transmembrane protein 59 like.
    
 0.657
MRPS26
Mitochondrial ribosomal protein S26.
   
  
 0.649
PDE6G
Phosphodiesterase 6G.
      
 0.641
HDAC3
Histone deacetylase; Belongs to the histone deacetylase family. HD Type 1 subfamily.
    
 0.631
UTP15
UTP15 small subunit processome component.
   
  
 0.534
ASB1
Ankyrin repeat and SOCS box containing 1.
  
   
 0.525
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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