STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LYSTLysosomal trafficking regulator. (3705 aa)    
Predicted Functional Partners:
NOLC1
Nucleolar and coiled-body phosphoprotein 1.
      
 0.811
NPLOC4
NPL4 homolog, ubiquitin recognition factor.
      
 0.741
ATP8A2
Phospholipid-transporting ATPase; Belongs to the cation transport ATPase (P-type) (TC 3.A.3) family. Type IV subfamily.
   
 0.715
MKLN1
Muskelin 1.
      
 0.697
RNF6
Ring finger protein 6.
      
 0.691
CLVS2
Clavesin 2.
      
 0.689
LOC102357090
Zgc:66447.
      
 0.675
MGST1
Microsomal glutathione S-transferase 1.
      
 0.629
VTA1
Vta1 domain-containing protein.
    
 
 0.611
LOC102347835
SERPIN domain-containing protein; Belongs to the serpin family.
     
 0.606
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.