Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CNPY4Canopy FGF signaling regulator 4. (250 aa)    
Predicted Functional Partners:
LRRC40
Leucine rich repeat containing 40.
    
 0.878
HSP90B1
Heat shock protein 90 beta family member 1.
    
 0.765
MED31
Mediator of RNA polymerase II transcription subunit 31; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors.
 
      0.722
CNPY1
Canopy FGF signaling regulator 1.
      
 0.680
FRMD5
FERM domain containing 5.
      
 0.593
ERGIC3
ERGIC and golgi 3.
 
 
    0.587
NAT9
N-acetyltransferase 9 (putative).
 
      0.489
RSPH1
Radial spoke head component 1.
      
 0.471
ACOT11
Acyl-CoA thioesterase 11.
      
 0.467
CECR2
CECR2 histone acetyl-lysine reader.
      
 0.467
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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