STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
H3A4B5_LATCHTFIIS N-terminal domain-containing protein. (631 aa)    
Predicted Functional Partners:
LEO1
LEO1 homolog, Paf1/RNA polymerase II complex component.
    
 0.993
ELOC
Elongin C; Belongs to the SKP1 family.
    
 0.966
CTR9
CTR9 homolog, Paf1/RNA polymerase II complex component.
    
 0.859
CDC73
Cell division cycle 73.
    
 0.816
RPL4
Ribosomal protein L4.
    
   0.806
RPL30
Ribosomal protein L30.
    
   0.806
RPL18A
60S ribosomal protein L18a; Belongs to the eukaryotic ribosomal protein eL20 family.
    
   0.806
RPL13A
Ribosomal protein L13a; Belongs to the universal ribosomal protein uL13 family.
    
   0.806
RPL35
Ribosomal protein L35.
    
   0.806
RPL15
Ribosomal protein L15; Belongs to the eukaryotic ribosomal protein eL15 family.
    
 
 0.797
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.