Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC102347143Uncharacterized protein. (612 aa)    
Predicted Functional Partners:
AHSG
Alpha 2-HS glycoprotein.
   
 0.948
FGG
Fibrinogen gamma chain.
   
 
 0.892
H3ACE0_LATCH
Insulin; Insulin decreases blood glucose concentration. It increases cell permeability to monosaccharides, amino acids and fatty acids. It accelerates glycolysis, the pentose phosphate cycle, and glycogen synthesis in liver.
      
 0.891
FGB
Fibrinogen beta chain.
   
 
 0.887
LOC102356587
Uncharacterized protein; Belongs to the peptidase S1 family. Plasminogen subfamily.
   
 0.843
PLG
Plasminogen; Belongs to the peptidase S1 family. Plasminogen subfamily.
   
 0.843
GAPDH
Glyceraldehyde-3-phosphate dehydrogenase.
   
  
 0.812
PXDN
Peroxidasin.
   
  
 0.802
PXDNL
Peroxidasin like.
   
  
 0.802
GLUD1
Glutamate dehydrogenase 1b; Belongs to the Glu/Leu/Phe/Val dehydrogenases family.
      
 0.792
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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