STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DOC2BDouble C2-like domain-containing protein. (393 aa)    
Predicted Functional Partners:
H3AIM8_LATCH
Uncharacterized protein.
 
    
 0.726
GEMIN4
Gem nuclear organelle associated protein 4.
      
 0.712
EMP2
Epithelial membrane protein 2.
      
 0.668
NDE1
NudE neurodevelopment protein 1.
      
 0.665
UTS2R
Urotensin 2 receptor; Belongs to the G-protein coupled receptor 1 family.
      
 0.664
LOC102349113
G_PROTEIN_RECEP_F1_2 domain-containing protein; Belongs to the G-protein coupled receptor 1 family.
      
 0.664
RAB3A
RAB3A, member RAS oncogene family.
   
 
 0.601
RAB3D
RAB3D, member RAS oncogene family.
   
 
 0.601
RAB3C
RAB3C, member RAS oncogene family.
   
 
 0.601
LMF1
Lipase maturation factor; Involved in the maturation of specific proteins in the endoplasmic reticulum; Belongs to the lipase maturation factor family.
      
 0.577
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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