Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
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Co-expression
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[Homology]
Score
LOC102346519Tetraspanin. (250 aa)    
Predicted Functional Partners:
PHF21A
PHD finger protein 21A.
   
  
 0.815
MAP2K5
Mitogen-activated protein kinase kinase 5; Belongs to the protein kinase superfamily.
      
 0.701
SMAD6
Mothers against decapentaplegic homolog.
      
 0.654
SOX6
SRY-box transcription factor 6.
      
 0.477
GADD45GIP1
GADD45G interacting protein 1.
      
 0.471
H3AG42_LATCH
Zgc:165604.
      
 0.468
PTGFRN
Prostaglandin F2 receptor inhibitor.
    
 
 0.445
CAB39
Calcium binding protein 39.
      
 0.434
CAB39L
Calcium binding protein 39 like.
      
 0.434
LOC102358653
Tetraspanin.
    
 
 0.423
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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