STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
WDYHV1WDYHV motif containing 1. (143 aa)    
Predicted Functional Partners:
NTAN1
N-terminal asparagine amidase.
    
 
 0.708
QTRT1
Queuine tRNA-ribosyltransferase catalytic subunit 1.
      
 0.699
GCDH
Glutaryl-CoA dehydrogenase.
      
 0.690
NUDT22
Nudix hydrolase 22.
      
 0.617
ABITRAM
Actin binding transcription modulator.
      
 0.616
ATE1
Arginyl-tRNA--protein transferase 1; Involved in the post-translational conjugation of arginine to the N-terminal aspartate or glutamate of a protein. This arginylation is required for degradation of the protein via the ubiquitin pathway. Belongs to the R-transferase family.
      
 0.605
ABTB1
Ankyrin repeat and BTB domain containing 1.
      
 0.601
TMED6
Transmembrane p24 trafficking protein 6.
      
 0.575
PCMTD1
Protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 1.
      
 0.564
BCKDK
Protein-serine/threonine kinase.
      
 0.563
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.