Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
WDYHV1WDYHV motif containing 1. (143 aa)    
Predicted Functional Partners:
QTRT1
Queuine tRNA-ribosyltransferase catalytic subunit 1.
      
 0.930
GCDH
Glutaryl-CoA dehydrogenase.
      
 0.928
BCKDK
Protein-serine/threonine kinase.
      
 0.863
ABITRAM
Actin binding transcription modulator.
      
 0.821
PCMTD1
Protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 1.
      
 0.795
NUDT22
Nudix hydrolase 22.
      
 0.795
TMED6
Transmembrane p24 trafficking protein 6.
      
 0.681
H2ZTH5_LATCH
Hydroxysteroid (17-beta) dehydrogenase 14.
    
   0.666
TRABD
TraB domain containing.
      
 0.660
LOC102357514
Uncharacterized protein.
      
 0.660
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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