STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GANCGal_mutarotas_2 domain-containing protein; Belongs to the glycosyl hydrolase 31 family. (916 aa)    
Predicted Functional Partners:
GNPTG
N-acetylglucosamine-1-phosphate transferase subunit gamma.
   
 0.626
LOC102364562
EF-hand domain-containing protein.
   
 0.626
PRKCSH
Protein kinase C substrate 80K-H.
   
 0.626
CLGN
Calmegin.
    
 0.555
CANX
Calnexin.
    
 0.555
DNAJC10
DnaJ heat shock protein family (Hsp40) member C10.
   
 0.493
GNE
Glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase.
  
 
 0.485
GYG2
Glycogenin 2.
     
 0.433
GYG1
Glycogenin 1.
     
 0.433
SIDT1
SID1 transmembrane family member 1.
      
 0.418
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.