STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LIN28BLin-28 homolog B. (279 aa)    
Predicted Functional Partners:
TUT4
Terminal uridylyl transferase 4.
   
 0.744
DROSHA
Drosha ribonuclease III.
   
 
 0.705
IGF2BP3
Insulin like growth factor 2 mRNA binding protein 3.
   
 
 0.621
POLR2F
RNA polymerase II subunit F.
   
 
 0.620
IGF2BP2
Insulin like growth factor 2 mRNA binding protein 2.
   
 
 0.618
HNRNPK
Heterogeneous nuclear ribonucleoprotein K.
    
 0.615
RPS11
Ribosomal protein S11; Belongs to the universal ribosomal protein uS17 family.
   
 
 0.614
SNRPD3
Small nuclear ribonucleoprotein Sm D3.
   
 0.613
SNRPE
Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.
   
 0.600
RPS2
Ribosomal protein S2; Belongs to the universal ribosomal protein uS5 family.
   
 
 0.600
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.