Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CCNB1IP1Cyclin B1 interacting protein 1. (276 aa)    
Predicted Functional Partners:
RNF212
Ring finger protein 212.
      
 0.641
MSH4
DNA mismatch repair protein; Component of the post-replicative DNA mismatch repair system (MMR).
      
 0.589
DMTF1
Cyclin D binding myb like transcription factor 1.
      
 0.554
MLH1
MutL homolog 1.
      
 0.524
FANCM
FA complementation group M.
      
 0.521
HFM1
Helicase for meiosis 1.
      
 0.518
MUS81
Uncharacterized protein.
      
 0.506
MLH3
MutL homolog 3.
      
 0.505
TEX11
Testis expressed 11.
      
 0.501
SPO11
SPO11 initiator of meiotic double stranded breaks.
      
 0.463
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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