STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCNB1IP1Cyclin B1 interacting protein 1. (276 aa)    
Predicted Functional Partners:
FANCM
FA complementation group M.
      
 0.702
MSH4
DNA mismatch repair protein; Component of the post-replicative DNA mismatch repair system (MMR).
      
 0.686
MLH1
MutL homolog 1.
      
 0.566
MLH3
MutL homolog 3.
      
 0.563
MUS81
Uncharacterized protein.
      
 0.554
SPO11
SPO11 initiator of meiotic double stranded breaks.
      
 0.537
TEX11
Testis expressed 11.
      
 0.517
RNF212
Ring finger protein 212.
   
  
 0.489
H2AZ2
Histone H2A; Belongs to the histone H2A family.
      
 0.468
SMC3
Structural maintenance of chromosomes protein.
      
 0.449
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.