STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
H3A4J9_LATCHSi:dkey-88l16.3. (1142 aa)    
Predicted Functional Partners:
AGRN
Agrin.
    
 0.885
SKOR2
SKI family transcriptional corepressor 2.
      
 0.767
LDLRAP1
Low density lipoprotein receptor adaptor protein 1b.
    
 0.763
H3BFA3_LATCH
NtA domain-containing protein.
    
 0.726
ANKRA2
Ankyrin repeat family A member 2.
    
 0.670
ITSN2
Intersectin 2.
    
 0.656
DAB2
DAB adaptor protein 2.
    
 0.654
H3BE69_LATCH
PID domain-containing protein.
    
 0.654
PCSK9
Proprotein convertase subtilisin/kexin type 9.
    
 0.631
MUSK
Muscle associated receptor tyrosine kinase.
   
 0.628
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.