Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
STARD7StAR related lipid transfer domain containing 7. (360 aa)    
Predicted Functional Partners:
YEATS2
YEATS domain containing 2.
      
 0.927
RAPGEF2
Rap guanine nucleotide exchange factor 2.
      
 0.825
MSH3
MutS homolog 3; Component of the post-replicative DNA mismatch repair system (MMR).
      
 0.742
TRIAP1
TP53 regulated inhibitor of apoptosis 1.
     
 0.725
H3ADZ2_LATCH
Si:dkey-78a14.4; Belongs to the arylamine N-acetyltransferase family.
    
   0.718
LOC102361569
Si:rp71-1f1.4; Belongs to the arylamine N-acetyltransferase family.
    
   0.718
STARD5
StAR related lipid transfer domain containing 5.
   
  
 0.700
STARD3
StAR related lipid transfer domain containing 3.
   
  
 0.691
PMS2
PMS1 homolog 2, mismatch repair system component.
      
 0.666
OMA1
OMA1 zinc metallopeptidase.
      
 0.664
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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