STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PRICKLE2Prickle planar cell polarity protein 2. (837 aa)    
Predicted Functional Partners:
VANGL1
Vang-like protein.
    
 0.974
VANGL2
Vang-like protein.
    
 0.974
DVL3
Dishevelled segment polarity protein 3.
    
 0.969
DVL1
Dishevelled segment polarity protein 1.
    
 0.969
PRICKLE1
Prickle planar cell polarity protein 1.
    
0.909
DVL2
Dishevelled segment polarity protein 2.
    
 0.708
H2ZTF5_LATCH
SCA7 domain-containing protein.
      
 0.705
ATXN7
Uncharacterized protein.
      
 0.700
MAGI1
Membrane associated guanylate kinase, WW and PDZ domain containing 1.
    
 
 0.682
ANKRD6
Ankyrin repeat domain 6.
    
 0.658
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.