Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CNMDChondromodulin. (355 aa)    
Predicted Functional Partners:
ITM2A
Integral membrane protein 2A.
    
 
 0.547
PRSS12
Serine protease 12; Belongs to the peptidase S1 family.
     
 0.487
SALL1
Spalt like transcription factor 1.
   
  
 0.470
OGT
O-linked N-acetylglucosamine (GlcNAc) transferase.
      
 0.456
NEDD9
Neural precursor cell expressed, developmentally down-regulated 9.
    
 0.455
APP
Amyloid beta precursor protein.
    
 0.439
TESC
Tescalcin.
      
 0.435
BACE2
Beta-secretase 2; Belongs to the peptidase A1 family.
    
 
 0.427
SCARB2
Scavenger receptor class B member 2; Belongs to the CD36 family.
     
 0.419
RHPN1
Rhophilin Rho GTPase binding protein 1.
     
 0.406
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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