Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
LOC102356297Uncharacterized protein; Belongs to the beta/gamma-crystallin family. (692 aa)    
Predicted Functional Partners:
CUEDC2
CUE domain containing 2.
      
 0.641
SNAPC5
Small nuclear RNA activating complex, polypeptide 5.
      
 0.615
GPAA1
Glycosylphosphatidylinositol anchor attachment 1.
      
 0.591
EIF3G
Eukaryotic translation initiation factor 3 subunit G; RNA-binding component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation. This subunit can bind 18S rRNA.
      
 0.588
PFDN2
Prefoldin subunit 2.
      
 0.568
ABHD16A
Abhydrolase domain containing 16A.
      
 0.526
GSK3A
Glycogen synthase kinase 3 alpha a; Belongs to the protein kinase superfamily.
    
   0.507
GSK3B
Glycogen synthase kinase 3 beta; Belongs to the protein kinase superfamily.
    
   0.507
CRYZL1
Crystallin zeta like 1.
    
 
 0.504
LOC102354290
Uncharacterized protein.
    
   0.497
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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