STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
H3A4M8_LATCHDUF4371 domain-containing protein. (482 aa)    
Predicted Functional Partners:
H3AEC9_LATCH
Dimer_Tnp_hAT domain-containing protein.
  
     0.428
H3AGD6_LATCH
DUF4371 domain-containing protein.
  
     0.427
H3ASG4_LATCH
DUF4371 domain-containing protein.
  
     0.424
H3B9S8_LATCH
DUF4371 domain-containing protein.
  
     0.415
H3AGB2_LATCH
Dimer_Tnp_hAT domain-containing protein.
  
     0.412
H3ADQ8_LATCH
TTF-type domain-containing protein.
  
     0.403
H3AQQ1_LATCH
Dimer_Tnp_hAT domain-containing protein.
  
     0.401
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.