Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SETBP1SET binding protein 1. (1387 aa)    
Predicted Functional Partners:
H3AIP7_LATCH
Uncharacterized protein.
 
 
    0.772
ARHGAP26
Rho GTPase activating protein 26.
      
 0.770
DACH1
Dachshund family transcription factor 1.
      
 0.712
MACROD2
Uncharacterized protein.
    
 0.705
GRID1
Glutamate ionotropic receptor delta type subunit 1.
      
 0.701
RPTOR
Regulatory associated protein of MTOR complex 1.
    
 
 0.692
PHF6
PHD finger protein 6.
   
 
 0.659
NEK4
NIMA related kinase 4.
    
 
 0.655
KDM6A
Lysine (K)-specific demethylase 6A.
   
 0.617
ZRSR2
Zinc finger CCCH-type, RNA binding motif and serine/arginine rich 2.
      
 0.611
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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