STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SETBP1SET binding protein 1. (1387 aa)    
Predicted Functional Partners:
H3AIP7_LATCH
Uncharacterized protein.
 
 
    0.771
ARHGAP26
Rho GTPase activating protein 26.
      
 0.758
RPTOR
Regulatory associated protein of MTOR complex 1.
    
 
 0.728
GRID1
Glutamate ionotropic receptor delta type subunit 1.
      
 0.703
MACROD2
Uncharacterized protein.
    
 0.699
EED
Embryonic ectoderm development.
    
 0.665
SUZ12
SUZ12 polycomb repressive complex 2 subunit.
    
 0.652
ARID4A
AT-rich interaction domain 4A.
   
 
 0.641
ASH2L
ASH2 like, histone lysine methyltransferase complex subunit.
    
 0.627
DACH1
Dachshund family transcription factor 1.
      
 0.625
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.