STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
H3A4S8_LATCHUncharacterized protein. (2030 aa)    
Predicted Functional Partners:
LAMC1
Laminin subunit gamma 1.
 
 
 0.711
LAMC3
Laminin subunit gamma 3.
   
 0.711
LAMC2
Uncharacterized protein.
   
 0.711
LAMB3
Laminin subunit beta 3.
 
 
 0.598
LAMB1
Laminin subunit beta 1.
 
 
 0.586
LOC102357703
Laminin, beta 2-like.
   
 0.584
LAMB2
Laminin subunit beta 2.
   
 0.584
LOC102356949
Netrin 2.
 
  
   0.583
PDZD7
PDZ domain containing 7.
    
 
 0.558
ADGRV1
Adhesion G protein-coupled receptor V1.
      
 0.535
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.