Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
DCLK3Doublecortin like kinase 3. (769 aa)    
Predicted Functional Partners:
CRYM
Crystallin mu.
   
  
 0.643
EPB41L1
Erythrocyte membrane protein band 4.1 like 1.
     
 0.618
THOC6
THO complex 6.
      
 0.600
TADA3
Transcriptional adaptor 3.
    
 
 0.589
PAQR6
Progestin and adipoQ receptor family member 6.
      
 0.576
PAQR5
Progestin and adipoQ receptor family member 5.
      
 0.576
ZNF292
Zinc finger protein 292.
    
 
 0.571
DCX
Uncharacterized protein.
 
  
 
0.551
SUPT3H
SPT3 homolog, SAGA and STAGA complex component.
   
  
 0.551
H3B3Z8_LATCH
WD_REPEATS_REGION domain-containing protein.
      
 0.515
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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