Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
DUSP28Dual specificity phosphatase 28. (161 aa)    
Predicted Functional Partners:
LOC102354330
Si:dkey-69o16.5.
      
 0.790
WDR33
WD repeat domain 33.
   
 0.680
ZC3H15
Zinc finger CCCH-type containing 15.
   
  
 0.662
METTL22
Methyltransferase like 22.
   
  
 0.642
SFT2D3
Vesicle transport protein; May be involved in fusion of retrograde transport vesicles derived from an endocytic compartment with the Golgi complex. Belongs to the SFT2 family.
      
 0.641
DNAJC22
DnaJ heat shock protein family (Hsp40) member C22.
   
 
 0.630
MYCBPAP
MYCBP associated protein.
    
 
 0.615
SLC9A8
Sodium/hydrogen exchanger; Belongs to the monovalent cation:proton antiporter 1 (CPA1) transporter (TC 2.A.36) family.
      
 0.583
LOC102358409
Uncharacterized protein.
    
 0.550
PTPN7
Protein tyrosine phosphatase non-receptor type 7.
    
 
 0.541
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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