STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
H3A4U8_LATCHUncharacterized protein. (2171 aa)    
Predicted Functional Partners:
JUP
Junction plakoglobin.
    
 0.595
CTNNB1
Catenin beta 1.
    
 0.595
PCDH15
Protocadherin related 15.
   
0.423
H3ANB1_LATCH
Uncharacterized protein.
   
0.423
H3B989_LATCH
Uncharacterized protein.
   
0.423
CTNND1
Catenin delta 1.
    
 0.411
CTNND2
Uncharacterized protein.
    
 0.411
H3B4B5_LATCH
Uncharacterized protein.
    
 0.411
ARVCF
ARVCF delta catenin family member.
    
 0.411
PKP4
Plakophilin 4.
    
 0.411
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.