Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
XKR6XK-related protein. (396 aa)    
Predicted Functional Partners:
H3AW32_LATCH
Uncharacterized protein.
 
     0.920
CASP3
Caspase 3; Belongs to the peptidase C14A family.
    
 0.904
XKR7
XK-related protein.
  
  
 
0.901
XKR4
XK-related protein.
  
  
 
0.901
BSG
Basigin (Ok blood group).
     
  0.900
H3AXX9_LATCH
XK-related protein.
 
      0.899
MTMR9
Myotubularin related protein 9.
      
 0.816
SH3BGR
Uncharacterized protein.
      
 0.759
B3GALT5
Hexosyltransferase.
      
 0.747
CCM2
CCM2 scaffold protein.
      
 0.680
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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