STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CDC42SE1CDC42 small effector 1. (78 aa)    
Predicted Functional Partners:
PNPLA4
PNPLA domain-containing protein.
      
 0.622
CDC42EP4
CDC42 effector protein 4.
      
 0.614
BAIAP2L1
BAI1 associated protein 2 like 1.
      
 0.585
CDC42BPB
CDC42 binding protein kinase beta; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family.
      
 0.575
TMED2
Transmembrane p24 trafficking protein 2.
      
 0.553
FLII
FLII actin remodeling protein.
      
 0.551
BAIAP2
BAI1 associated protein 2.
      
 0.477
CDC42
Cell division cycle 42.
    
 
 0.441
LOC102360735
Uncharacterized protein.
      
 0.439
CREB3
cAMP responsive element binding protein 3.
   
  
 0.439
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.