Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CDC42SE1CDC42 small effector 1. (78 aa)    
Predicted Functional Partners:
CDC42EP4
CDC42 effector protein 4.
      
 0.846
BAIAP2L1
BAI1 associated protein 2 like 1.
      
 0.793
CDC42BPB
CDC42 binding protein kinase beta; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family.
      
 0.789
PNPLA4
PNPLA domain-containing protein.
      
 0.772
CDC42
Cell division cycle 42.
    
 
 0.733
CDC42EP3
CDC42 effector protein 3.
      
 0.692
FLII
FLII actin remodeling protein.
      
 0.647
TMED2
Transmembrane p24 trafficking protein 2.
      
 0.641
BAIAP2
BAI1 associated protein 2.
      
 0.613
CREB3
cAMP responsive element binding protein 3.
   
  
 0.609
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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