Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
H3A4V3_LATCHALMS_motif domain-containing protein. (315 aa)    
Predicted Functional Partners:
PLK1
Serine/threonine-protein kinase PLK.
    
 0.939
CEP290
Centrosomal protein 290.
   
 0.842
H3BA08_LATCH
Uncharacterized protein.
    
 0.750
PLK4
Polo like kinase 4.
    
 0.748
CEP164
Centrosomal protein 164.
     
 0.748
LOC102364679
Centrin 4.
    
 0.716
UNC79
Unc-79 homolog, NALCN channel complex subunit.
    
 0.712
H3AJT4_LATCH
MSP domain-containing protein.
   
 0.690
CEP192
Uncharacterized protein.
   
 0.690
BORA
BORA aurora kinase A activator.
     
  0.671
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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