STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BTBD9BTB domain containing 9. (536 aa)    
Predicted Functional Partners:
FAF1
Fas associated factor 1.
    
   0.923
UBXN7
UBX domain-containing protein 7.
    
   0.923
UBXN1
UBX domain protein 1.
    
   0.923
MRPL27
Mitochondrial ribosomal protein L27.
   
 
 0.862
LOC102356981
Uncharacterized protein.
   
 
 0.861
MRPL23
Mitochondrial ribosomal protein L23.
   
 
 0.861
MRPL46
Mitochondrial ribosomal protein L46.
   
 
 0.858
MRPL22
Mitochondrial ribosomal protein L22; Belongs to the universal ribosomal protein uL22 family.
   
 
 0.846
MRPL47
Mitochondrial ribosomal protein L47.
   
 
 0.842
MRPL19
Mitochondrial ribosomal protein L19.
   
 
 0.841
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.