STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MYL1Myosin light chain 1. (211 aa)    
Predicted Functional Partners:
MYLPF
Myosin light chain, phosphorylatable, fast skeletal muscle.
   
 0.945
LOC102347576
SH3 domain-containing protein.
   
 
 0.902
LOC102346545
Myosin, light chain 12, genome duplicate 2.
   
0.885
MYL9
Myosin light chain 9.
   
0.885
TNNI2
Troponin I2, fast skeletal type.
   
 0.879
TNNT1
Troponin T1, slow skeletal type.
   
 0.844
TNNT3
Troponin T3, fast skeletal type.
   
 0.844
TNNT2
Troponin T2, cardiac type.
   
 0.844
TNNI3
Uncharacterized protein.
   
 0.843
TPM3
Tropomyosin 3; Belongs to the tropomyosin family.
   
 0.834
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.