Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SNAP25Synaptosomal-associated protein; Belongs to the SNAP-25 family. (206 aa)    
Predicted Functional Partners:
VAMP2
V-SNARE coiled-coil homology domain-containing protein.
   
 0.998
CPLX2
Complexin 2.
   
 0.994
SYT1
Synaptotagmin 1.
   
 0.984
LOC102360318
V-SNARE coiled-coil homology domain-containing protein.
   
 0.983
STX1A
Syntaxin 1A; Belongs to the syntaxin family.
   
 0.978
SYT2
Synaptotagmin 2.
   
 0.975
NAPA
NSF attachment protein alpha.
   
 0.972
LOC102346261
N-ethylmaleimide-sensitive factor attachment protein, beta b.
   
 0.972
VAMP7
Vesicle associated membrane protein 7; Belongs to the synaptobrevin family.
   
 0.970
STX3
Syntaxin 3; Belongs to the syntaxin family.
   
 0.966
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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