STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC102363050Parvalbumin 3; Belongs to the parvalbumin family. (109 aa)    
Predicted Functional Partners:
CASK
Calcium/calmodulin dependent serine protein kinase; Belongs to the MAGUK family.
    
 0.711
EYA4
Eyes absent homolog; Belongs to the HAD-like hydrolase superfamily. EYA family.
      
 0.652
WDR90
WD repeat domain 90.
   
 0.594
RIMS2
Regulating synaptic membrane exocytosis 2a.
      
 0.572
RIMS2-2
Regulating synaptic membrane exocytosis 2.
      
 0.572
SLC17A8
Solute carrier family 17 member 8.
    
 
 0.542
PXDNL
Peroxidasin like.
      
 0.499
PXDN
Peroxidasin.
      
 0.495
SIX2
SIX homeobox 2.
      
 0.489
DCLK1
Doublecortin like kinase 1; Belongs to the protein kinase superfamily.
   
 0.484
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.