Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC102363050Parvalbumin 3; Belongs to the parvalbumin family. (109 aa)    
Predicted Functional Partners:
H3A4Z6_LATCH
Uncharacterized protein.
   
 0.680
H3AIN8_LATCH
Uncharacterized protein.
   
 0.680
EYA4
Eyes absent homolog; Belongs to the HAD-like hydrolase superfamily. EYA family.
      
 0.658
H3BHD2_LATCH
C1q domain-containing protein.
      
 0.653
RIMS2-2
Regulating synaptic membrane exocytosis 2.
      
 0.638
CALB2
Calbindin 2.
      
 0.613
SST
Somatostatin.
      
 0.593
TECTA
Tectorin alpha.
   
 0.590
WDR90
WD repeat domain 90.
   
 0.578
TNNI2
Troponin I2, fast skeletal type.
   
 0.572
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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