Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ASB18Ankyrin repeat and SOCS box containing 18. (466 aa)    
Predicted Functional Partners:
NEDD8
NEDD8 ubiquitin like modifier.
    
  0.531
COMMD9
COMM domain containing 9.
    
  0.517
COMMD5
COMM domain containing 5.
    
  0.513
COMMD8
COMM domain containing 8.
   
  0.507
H3ASI2_LATCH
Uncharacterized protein.
    
  0.494
ASB5
Ankyrin repeat and SOCS box containing 5.
  
 
0.487
ASB1
Ankyrin repeat and SOCS box containing 1.
  
  
0.487
ASB6
Ankyrin repeat and SOCS box containing 6.
  
  
 0.475
ASB9
Ankyrin repeat and SOCS box containing 9.
  
 
0.466
COPS8
COP9 signalosome subunit 8.
    
 0.463
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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