STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC102351339CARD- and ANK-containing Inflammasome Adaptor Protein. (757 aa)    
Predicted Functional Partners:
RNF146
Ring finger protein 146.
    
 0.726
H3ADK7_LATCH
ETS domain-containing protein.
      
 0.700
LOC102347078
ArfGAP with GTPase domain, ankyrin repeat and PH domain 3.
    
 0.686
AXIN1
Axin 1.
    
 0.670
AXIN2
Axin 2.
    
 0.670
MPEG1
Macrophage expressed 1.
      
 0.659
NLRC4
NLR family CARD domain containing 4.
      
 0.651
SP6
Sp6 transcription factor.
    
 0.607
SPTBN1
Spectrin beta chain; Belongs to the spectrin family.
   
 0.562
SPTB
Spectrin beta chain; Belongs to the spectrin family.
   
 0.562
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.