Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
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Co-expression
Experiments
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[Homology]
Score
LOC102351339CARD- and ANK-containing Inflammasome Adaptor Protein. (757 aa)    
Predicted Functional Partners:
LOC102347078
ArfGAP with GTPase domain, ankyrin repeat and PH domain 3.
    
 
 0.732
H3ADK7_LATCH
ETS domain-containing protein.
      
 0.716
BARD1
BRCA1 associated RING domain 1.
  
 
0.695
SP6
Sp6 transcription factor.
    
 0.665
NLRC4
NLR family CARD domain containing 4.
      
 0.659
MPEG1
Macrophage expressed 1.
      
 0.658
BABAM1
BRISC and BRCA1 A complex member 1.
    
  0.643
MAP1LC3B
Microtubule-associated protein 1 light chain 3 beta.
   
 
 0.636
SPTAN1
Spectrin alpha, non-erythrocytic 1.
   
 0.636
BRCA1
BRCA1 DNA repair associated.
    
  0.613
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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