STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PALLDPalladin, cytoskeletal associated protein. (1438 aa)    
Predicted Functional Partners:
WDR18
WD repeat domain 18.
   
 0.712
TEX10
Testis expressed 10.
   
 0.660
PES1
Pescadillo homolog; Component of the PeBoW complex, which is required for maturation of 28S and 5.8S ribosomal RNAs and formation of the 60S ribosome.
   
 0.625
LOC102347576
SH3 domain-containing protein.
   
 0.611
PRRX2
Paired related homeobox 2.
    
 
 0.557
TGFB1I1
Transforming growth factor beta 1 induced transcript 1.
    
 0.545
ACTN2
Actinin alpha 2.
   
 0.519
ACTN3
Actinin alpha 3a.
   
 0.519
FKBP10
Peptidylprolyl isomerase.
    
 
 0.508
ANKRD1
Ankyrin repeat domain 1.
   
 0.501
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.