Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
VIPVasoactive intestinal peptide. (205 aa)    
Predicted Functional Partners:
VIPR1
Vasoactive intestinal peptide receptor 1; Belongs to the G-protein coupled receptor 2 family.
    
 0.990
CALCB
Calcitonin related polypeptide beta.
   
 
 0.923
H3ALZ2_LATCH
Uncharacterized protein.
   
  
 0.745
PRL
Prolactin.
   
  
 0.745
H3AWR7_LATCH
G_PROTEIN_RECEP_F2_4 domain-containing protein; Belongs to the G-protein coupled receptor 2 family.
    
 0.709
ADCYAP1R1
ADCYAP receptor type I; Belongs to the G-protein coupled receptor 2 family.
    
 0.709
SST
Somatostatin.
   
  
 0.670
CCK
Cholecystokinin.
   
  
 0.660
H3AJ73_LATCH
Gastrin domain-containing protein.
   
  
 0.605
GAL
Galanin and GMAP prepropeptide.
      
 0.590
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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