STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
H3A5F1_LATCHUBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family. (153 aa)    
Predicted Functional Partners:
UBE2V2-2
Ubiquitin-conjugating enzyme E2 variant 2.
   
 0.996
UBE2V1
UBIQUITIN_CONJUGAT_2 domain-containing protein.
   
 0.996
TRIP12
Thyroid hormone receptor interactor 12.
   
 0.946
ZFAND4
Zinc finger AN1-type containing 4.
   
 0.820
ANAPC11
APC11 anaphase promoting complex subunit 11 homolog (yeast).
    
 0.807
RPS27A
Ribosomal protein S27a.
   
 0.785
BIRC6
Baculoviral IAP repeat containing 6.
   
 0.780
UBE2V2
Ubiquitin conjugating enzyme E2 V2.
   
 0.779
CDC16
Cell division cycle 16.
    
 0.763
UBE2K
Ubiquitin conjugating enzyme E2 K; Belongs to the ubiquitin-conjugating enzyme family.
   
0.759
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
Server load: low (34%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.