FMNL1 protein (Latimeria chalumnae) - STRING interaction network

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

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textmining

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experimentally determined

co-expression

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gene neighborhood

gene co-occurrence

gene fusions

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[Homology]

Score

FMNL1

Uncharacterized protein. (1076 aa)

Predicted Functional Partners:

KLHL38

0.809

DUSP27

0.806

NPHP4

0.773

CDC42

0.667

COL9A1

0.653

FLCN

0.573

STOML1

0.569

LOC102348524

0.547

LOC102350273

0.547

RHOA

0.547

Your Current Organism:

Latimeria chalumnae

NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth

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structured XML interaction data, according to the 'PSI-MI' data standard

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... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CDC42	FMNL1	ENSLACP00000018010	ENSLACP00000004874	Cell division cycle 42.	Uncharacterized protein.	0.667
CDC42	LOC102348524	ENSLACP00000018010	ENSLACP00000004714	Cell division cycle 42.	Uncharacterized protein.	0.589
CDC42	LOC102350273	ENSLACP00000018010	ENSLACP00000007743	Cell division cycle 42.	Uncharacterized protein.	0.589
CDC42	RHOA	ENSLACP00000018010	ENSLACP00000019259	Cell division cycle 42.	Uncharacterized protein.	0.589
COL9A1	DUSP27	ENSLACP00000001247	ENSLACP00000003753	LAM_G_DOMAIN domain-containing protein.	Dual specificity phosphatase 27, atypical; Belongs to the protein-tyrosine phosphatase family. Non- receptor class dual specificity subfamily.	0.666
COL9A1	FMNL1	ENSLACP00000001247	ENSLACP00000004874	LAM_G_DOMAIN domain-containing protein.	Uncharacterized protein.	0.653
COL9A1	KLHL38	ENSLACP00000001247	ENSLACP00000007335	LAM_G_DOMAIN domain-containing protein.	Kelch like family member 38.	0.653
DUSP27	COL9A1	ENSLACP00000003753	ENSLACP00000001247	Dual specificity phosphatase 27, atypical; Belongs to the protein-tyrosine phosphatase family. Non- receptor class dual specificity subfamily.	LAM_G_DOMAIN domain-containing protein.	0.666
DUSP27	FMNL1	ENSLACP00000003753	ENSLACP00000004874	Dual specificity phosphatase 27, atypical; Belongs to the protein-tyrosine phosphatase family. Non- receptor class dual specificity subfamily.	Uncharacterized protein.	0.806
DUSP27	KLHL38	ENSLACP00000003753	ENSLACP00000007335	Dual specificity phosphatase 27, atypical; Belongs to the protein-tyrosine phosphatase family. Non- receptor class dual specificity subfamily.	Kelch like family member 38.	0.839
FLCN	FMNL1	ENSLACP00000010737	ENSLACP00000004874	Folliculin.	Uncharacterized protein.	0.573
FMNL1	CDC42	ENSLACP00000004874	ENSLACP00000018010	Uncharacterized protein.	Cell division cycle 42.	0.667
FMNL1	COL9A1	ENSLACP00000004874	ENSLACP00000001247	Uncharacterized protein.	LAM_G_DOMAIN domain-containing protein.	0.653
FMNL1	DUSP27	ENSLACP00000004874	ENSLACP00000003753	Uncharacterized protein.	Dual specificity phosphatase 27, atypical; Belongs to the protein-tyrosine phosphatase family. Non- receptor class dual specificity subfamily.	0.806
FMNL1	FLCN	ENSLACP00000004874	ENSLACP00000010737	Uncharacterized protein.	Folliculin.	0.573
FMNL1	KLHL38	ENSLACP00000004874	ENSLACP00000007335	Uncharacterized protein.	Kelch like family member 38.	0.809
FMNL1	LOC102348524	ENSLACP00000004874	ENSLACP00000004714	Uncharacterized protein.	Uncharacterized protein.	0.547
FMNL1	LOC102350273	ENSLACP00000004874	ENSLACP00000007743	Uncharacterized protein.	Uncharacterized protein.	0.547
FMNL1	NPHP4	ENSLACP00000004874	ENSLACP00000021760	Uncharacterized protein.	Nephrocystin 4.	0.773
FMNL1	RHOA	ENSLACP00000004874	ENSLACP00000019259	Uncharacterized protein.	Uncharacterized protein.	0.547