Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ETF1Eukaryotic translation termination factor 1. (437 aa)    
Predicted Functional Partners:
ABCE1
ATP binding cassette subfamily E member 1.
   
 
 0.991
GSPT1
G1 to S phase transition 1.
   
 0.990
JMJD4
Jumonji domain containing 4.
    
 0.987
SMG1
SMG1 nonsense mediated mRNA decay associated PI3K related kinase; Belongs to the PI3/PI4-kinase family.
    
 
 0.986
UPF1
UPF1 RNA helicase and ATPase.
   
 0.951
FAU
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
   
 0.950
RPS23
Ribosomal protein S23; Belongs to the universal ribosomal protein uS12 family.
  
 0.948
RPL12
Ribosomal protein L12; Belongs to the universal ribosomal protein uL11 family.
  
  0.944
RPS27A
Ribosomal protein S27a.
   
 0.931
RPS5
Ribosomal protein S5; Belongs to the universal ribosomal protein uS7 family.
  
 0.928
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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