STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PLA2G4FPhospholipase A2. (785 aa)    
Predicted Functional Partners:
LOC102359416
Uncharacterized protein.
     
  0.929
LOC102351457
Retinoic acid receptor responder 3-like.
     
 0.928
PLA2G1B
Phospholipase A(2).
     
 0.923
LOC102359454
Phospholipase A(2).
     
 0.923
LOC102354262
Mitogen-activated protein kinase.
    
  0.921
MAPK1
Mitogen-activated protein kinase; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. MAP kinase subfamily.
    
  0.921
H3AX69_LATCH
Phospholipase A(2).
     
 0.914
H3BIC9_LATCH
Phospholipase A(2).
     
 0.914
PTDSS1
Phosphatidylserine synthase 1.
     
 0.912
PTDSS2
Phosphatidylserine synthase 2.
     
 0.912
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
Server load: medium (44%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.