STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC102347296Uncharacterized protein. (876 aa)    
Predicted Functional Partners:
GLCE
Glucuronic acid epimerase.
   
 0.939
NDST2
N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 2a.
  
 
0.911
LOC102363669
N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 3.
  
  
 
0.900
EXTL3
Exostosin like glycosyltransferase 3; Belongs to the glycosyltransferase 47 family.
   
  
 0.830
UGT8
UDP glycosyltransferase 8; Belongs to the UDP-glycosyltransferase family.
      
 0.740
PRSS12
Serine protease 12; Belongs to the peptidase S1 family.
      
 0.669
B3GAT3
Galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase; Belongs to the glycosyltransferase 43 family.
    
 
 0.592
SDC4
Syndecan; Cell surface proteoglycan; Belongs to the syndecan proteoglycan family.
     
 0.580
UXS1
UDP-glucuronate decarboxylase 1.
      
 0.577
FLI1
Fli-1 proto-oncogene, ETS transcription factor.
      
 0.540
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.