STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
VIPR1Vasoactive intestinal peptide receptor 1; Belongs to the G-protein coupled receptor 2 family. (274 aa)    
Predicted Functional Partners:
VIP
Vasoactive intestinal peptide.
    
 0.985
ADCYAP1
Adenylate cyclase activating polypeptide 1.
    
 0.976
RAMP2
Uncharacterized protein.
    
 0.763
ATG5
Autophagy protein 5; Involved in autophagic vesicle formation.
      
 0.699
TSPAN2
Tetraspanin.
      
 0.691
PTGS1
Prostaglandin-endoperoxide synthase 1.
      
 0.686
RAMP3
Receptor activity modifying protein 3.
    
 0.660
GNAI1
G protein subunit alpha i1.
    
 
 0.652
CRH
Corticotropin releasing hormone.
    
 0.629
GNAS
GNAS complex locus.
    
 0.623
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.