STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TNFAIP6TNF alpha induced protein 6. (279 aa)    
Predicted Functional Partners:
PTX3
Uncharacterized protein.
   
 
 0.797
PLD2-2
Uncharacterized protein.
   
 
 0.797
LOC102363090
Multifunctional fusion protein; Belongs to the intercrine alpha (chemokine CxC) family.
   
 
 0.761
H3AUC6_LATCH
Link domain-containing protein.
     
0.753
BTC
EGF-like domain-containing protein.
      
 0.627
HAS1
Hyaluronan synthase 1.
   
  
 0.617
FNTA
Farnesyltransferase, CAAX box, alpha.
      
 0.613
IL6
Uncharacterized protein.
   
  
 0.605
HAS3
Hyaluronan synthase 3.
   
  
 0.604
HAS2
Hyaluronan synthase 2.
   
  
 0.604
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.